Cambridge Healthtech Institutes 3rd Annual

Maximizing Protein Production Workflows

Decreasing Delivery Times of High-Quality Proteins to Support Research & Development

May 16 - 17, 2024 ALL TIMES EST

Protein production is so much more than the act of expressing the protein itself. At the 3rd Annual Maximizing Protein Production Workflows conference hosted by the Cambridge Healthtech Institute, we explore the comprehensive protein expression management process in laboratories from discovery R&D to process development. Our goal is to examine the entire workflow to discover tactics for minimizing production time. Discussion topics will encompass the evaluation of throughput requirements, the integration of automation for enhanced throughput, and a rigorous assessment of your protein production procedures to identify and resolve bottlenecks, ultimately improving overall efficiency.

Sunday, May 12

Main Conference Registration1:00 pm

Recommended Pre-Conference Short Course2:00 pm

SC2: How to Use and Improve Microbial Expression Systems for Recombinant Protein Production

*Separate registration required. See short course page for details.

Tuesday, May 14

Recommended Dinner Short Course6:30 pm

SC7: The Use and Optimization of Eukaryotic Expression Systems to Support Therapeutic Generation and Structural Biology 

*Separate registration required. See short course page for details.

Thursday, May 16

WOMEN IN SCIENCE BREAKFAST

7:30 am

PANEL DISCUSSION: Fostering Mentorship and Company Culture for the Advancement of Gender Equity: IN-PERSON ONLY
(Continental Breakfast Provided) 
Co-Organized with Thinkubator Media

PANEL MODERATOR:

Lori Lennon, Founder & CEO, Thinkubator Media

Advancing gender equity in the workplace is an effort that requires mentorship, shifts in company culture, and investment from all levels of an organization. Join us for a robust and insightful conversation on how companies can foster quality mentorship, create team-based success models, develop meaningful and measurable commitments to DEI, and how this important work can greatly benefit an organization and its goals.

PANELISTS:

Tom Browne, Director of Diversity, Equity, & Inclusion, MassBio

Sheila Phicil, Equity Architect, Director of Innovation, Health Equity Accelerator, Boston Medical Center (BMC)

Nicole Renaud, PhD, Director, Global Co-Lead of Human Genetics and Targets, Discovery Science, Biomedical Research, Novartis

Kerry Robert, Senior Vice President, Head of People & Culture, Entrada Therapeutics

Minmin (Mimi) Yen, PhD, CEO & Co-Founder, PhagePro Inc.

Registration and Morning Coffee7:30 am

MEETING PRODUCTION CHALLENGES: DOING MORE WITH LESS

8:45 am

Chairperson's Remarks

Richard Altman, MS, Field Application Scientist, Life Science Solutions, Thermo Fisher Scientific

8:50 am

FEATURED PANEL DISCUSSION: Protein Production Lab Challenges: Methodologies, Strategies, and the Art of Managing Multiple Projects

PANEL MODERATOR:

Richard Altman, MS, Field Application Scientist, Life Science Solutions, Thermo Fisher Scientific

Protein expression laboratories provide crucial support to drug discovery efforts. This panel discussion will focus on the concepts, technologies, and strategies necessary to meet the ever-increasing need for recombinant proteins.     

  • ​Know your protein
  • Strategies on how to manage multiple “top priority” projects         
  • Total workflow efficiency          
  • The importance of tech development to long term success        
  • Troubleshooting strategies or how much time should be spent before moving to the next option?
PANELISTS:

Kanika Bajaj Pahuja, PhD, Senior Scientific Manager, Protein Sciences, Genentech Inc.

Dominic Esposito, PhD, Director, Protein Sciences, Frederick National Laboratory

Bjørn Voldborg, MSc, Head, National Biologics Facility, DTU Bioengineering, Technical University of Denmark

Jessica Williamson, PhD, Head of US Protein Sciences, UCB

9:50 am

Collaboration-Based Communities to Support Expression/Production Projects

Dominic Esposito, PhD, Director, Protein Sciences, Frederick National Laboratory

Bjørn Voldborg, MSc, Head, National Biologics Facility, DTU Bioengineering, Technical University of Denmark

PIG and P4EU are professional networks, engaged in various aspects of protein expression, purification, and characterization in settings such as core technology platforms. It is a forum for informal exchange of experiences and solutions to common problems to avoid “re-invention of the wheel” in parallel and facilitates contacts between like-minded scientists in an open atmosphere with the meetings being highly stimulating events with high-quality talks as rich sources of inspiration.

10:20 am Enhancing Therapeutic Protein Production with Gibson SOLA DNA Assembly: Pioneering On-Demand DNA and mRNA Synthesis

Decky Goodrich, Sr. Vice President, Corporate Development, Telesis Bio

We will examine Gibson SOLA's capabilities in on-demand DNA and mRNA synthesis and its impact on accelerating therapeutic protein production. This technology offers a scalable, efficient, and IP-secure, on-premises solution to address modern biotechnological challenges effectively.

Coffee Break in the Exhibit Hall with Poster Viewing10:50 am

WOMEN IN SCIENCE MEET-UP

11:00 am

Meet Fellow Women Scientists, Celebrate Successes, and Inspire the Future Generations of Female Leaders

Lori Lennon, Founder & CEO, Thinkubator Media

The Women in Science Meet-Up celebrates female trailblazers who are setting their own course in science. We invite all to come celebrate the successes of these women in breaking down barriers and inspiring future generations of female leaders. Come join fellow scientists and share your personal and professional journey.​

  • Who or What inspires you to explore a career in science?
  • What fuels your imagination and spirit when you’re faced with challenges?
  • What is your proudest moment?
  • What can each of us do to improve things further?​​​

Transition to Plenary Fireside Chat11:50 am

PLENARY FIRESIDE CHAT

12:00 pm

What Comes Next in Antibody Discovery and Engineering?

PANEL MODERATOR:

K. Dane Wittrup, PhD, C.P. Dubbs Professor, Chemical Engineering & Bioengineering, Massachusetts Institute of Technology

  • How significantly will domain antibodies supersede Fabs in antibody-like structures in the future? Considering the generally superior biophysical attributes of domain antibodies relative to Fabs, what advantages, aside from extensive clinical experience, do Fabs offer?  
  • Is the field of antibody engineering nearing a point where it can be considered a solved problem? How frequently do we fail to discover a lead candidate that aligns with a realistic target product profile?
  •  If we had access to a completely predictive computational method for antibody design, how would this quantifiably enhance the antibody discovery and optimization process? Would this truly revolutionize the field, especially considering the advanced experimental techniques we currently possess? Is there often (or ever) an atomically precise understanding of the exact structural epitope we aim for an antibody to target in order to achieve pharmacological benefit? Are there gaps in the existing experimental tools for developability optimization?​
PANELISTS:

Paul J. Carter, PhD, Genentech Fellow, Antibody Engineering, Genentech

Daniel Chen, MD, PhD, Founder & CEO, Synthetic Design Lab

Jane K. Osbourn, PhD, CSO, Alchemab Therapeutics Ltd.

Luncheon in the Exhibit Hall and Last Chance for Poster Viewing12:55 pm

HAPPY CELLS ARE PRODUCTIVE CELLS

2:30 pm

Chairperson's Remarks

Jessica Williamson, PhD, Head of US Protein Sciences, UCB

2:35 pm

Maximizing Recombinant Protein Quality and Quantity in Cells

Brian Meyer, PhD, Principal Scientist, Merck

The following presentation focuses on key factors to consider to increase both the quantity and quality of the recombinant protein of interest. These include the following: system/organism utilized to generate the recombinant protein, ability to enhance the properties of the subject protein via nucleic or amino acid sequence changes, and purification process utilized, such as standard vs. affinity chromatography methods.

2:57 pm

Rapid CHO Cell Pools, a Gentler Alternative to Large Scale Transient Transfection

Mark Ellis, Senior Principal Scientist, UCB BioPharma

Large-scale transient antibody expression is essential for the progression of UCB’s therapeutic pipeline. For over 10 years, we have routinely used our proprietary cell line CHO SXE for large-scale transient expression of antibodies. Recently, we engineered these cells to be GS knockouts which enabled the rapid generation of stable pools using a transposase system. From these pools we obtain higher yields, with less heterogeneity.

3:19 pm

Impacts of Cell Substrate on Therapeutic Protein Products

Erica J. Fratz-Berilla, PhD, Senior Research Scientist, Office of Pharmaceutical Quality Research, FDA CDER

Cell substrate manufacturing changes can generate challenging regulatory questions because of the potential to impact therapeutic protein structure, potency, and/or impurity profiles, which in turn may or may not impact pharmacokinetics, pharmacodynamics, clinical safety, and/or efficacy. This presentation will summarize current knowledge on the impacts of cell substrate on therapeutic protein product quality attributes and present process and product quality data from cell lines expressing non-originator NISTmAb.

3:41 pm

BioPhorum CLD Workstream Series: Evaluation of Genetic Re-arrangements in Site-Specific Integration Cell Lines

Barbara Tevelev, PhD, Senior Scientist, Cell Line Development, Biotherapeutics Pharmaceutical Sciences, Pfizer

Site Specific Integration (SSI) expression systems offer robust means of generating highly productive and stable cell lines for standard mAbs. However, the SSI system is not immune to genetic rearrangements and complex multi-specific modalities can prove challenging for the SSI expression systems. Here we present two SSI cell lines which were characterized to contain off-target genetic events. These events were found to have no impact on the phenotypic stability nor product quality, and both cell lines were deemed to be commercially viable.

4:05 pm From Screening to Large Scale Purification: Versatility of Strep-Tactin®XT Magnetic Beads

Fabian Mohr, PhD, Chief Scientific Officer, IBA Lifesciences

MagStrep® beads address the evolving laborious and time-consuming change challenges in protein purification by enabling a rapid and efficient purification process that also makes automation and scalability feasible. With their high binding capacity and specificity, these beads ensure superior purity and yield. MagStrep® Beads are a cutting-edge solution, providing unmatched efficiency, convenience, and performance in protein purification. 

4:20 pm Bringing the Unproducible to the Clinic: Complement Factor H Produced in Moss

Andreas Schaaf, PhD, CSO, eleva GmbH

Several complex proteins fail to yield satisfactory expression results in established systems. Factor H, a large, repetitive and highly glycosylated regulator of complement constantly resisted recombinant production. Its therapeutic potential remained therefore inaccessible as purification from donor blood remains both insufficient and insecure.Moss-produced Factor H yields high titers, outstanding quality and process robustness. CPV-104, the moss-produced factor H proved efficacious and safe in preclinical development and currently produced for clinical testing.

Networking Refreshment Break4:35 pm

THINK TANKS

5:00 pm

Expression Think Tanks—IN PERSON ONLY

Mary Ann Brown, Executive Director, Conferences, Cambridge Healthtech Institute

  • What challenges have we faced? 
  • What types of improvements are needed in expression hosts? 
  • Strategies for maintaining healthy cultures?
  • What might address the future and what is needed?

Join a group (topic of your choice) to share and experience and hear what others have learned:

     1) Issues and challenges with current expression systems 
     2) New expression systems and process improvements
     3) Parallel simultaneous testing of expression systems
     4) Customizing cell culture media and conditions​

5:30 pm Think Tank Report-Outs: Listen and Learn

During the Think Tank Table discussions, we shared our experiences and working solutions for end-to-end protein production workflows. Now as a collective community, let’s hear from the table facilitators as they share key discussion points and strategies, and provide a wrap-up of their table’s discussion. What can we take away and apply?

Close of Day6:00 pm

Friday, May 17

Registration Open7:00 am

INTERACTIVE DISCUSSIONS

7:30 amInteractive Roundtable Discussions with Continental Breakfast

Interactive Roundtable Discussions are informal, moderated discussions, allowing participants to exchange ideas and experiences and develop future collaborations around a focused topic. Each discussion will be led by a facilitator who keeps the discussion on track and the group engaged. To get the most out of this format, please come prepared to share examples from your work, be a part of a collective, problem-solving session, and participate in active idea sharing. Please visit the Interactive Roundtable Discussions page on the conference website for a complete listing of topics and descriptions.

TABLE 4: R&D with the End-in-Mind- IN PERSON ONLY

Bjørn Voldborg, MSc, Head, National Biologics Facility, DTU Bioengineering, Technical University of Denmark

  • Determine what your end-product could look like
  • Consider the full pipeline of your candidate as early as possible
  • Select suitable expression systems early on
  • Use regulatory acceptable hosts as soon as possible
TABLE 5:

Biotherapeutic Expression & Production Pipeline – Week in Review- IN PERSON ONLY

Richard Altman, MS, Field Application Scientist, Life Science Solutions, Thermo Fisher Scientific

Henry C. Chiou, PhD, Senior Director General Manager, Biosciences, Thermo Fisher Scientific

Dominic Esposito, PhD, Director, Protein Sciences, Frederick National Laboratory

We discuss the following in an interactive roundtable environment:
  • Highlights from the week’s presentations
  • New technologies and strategies
  • With these new technologies, how do we increase not only the efficiency and throughput of recombinant protein expression, but of the entire protein production process?
  • Challenges and future trends

OPTIMIZING WORKFLOWS WITH AUTOMATION

8:25 am

Chairperson's Remarks

Felix Findeisen, PhD, Associate Director, Discovery Biotherapeutics, Bristol Myers Squibb

8:30 am

A New High-Throughput Screening Method for Selections of CHO Cell Lines Unsusceptible to Recombinant Antibody Reduction

Tsuyoshi Yamaguchi, Research Scientist, Bioprocess Research and Development Laboratories, Manufacturing Division, Kyowa Kirin Co., Ltd.

Reduction of interchain disulfide bonds in monoclonal antibodies (mAbs) is one of the critical issues in large-scale mAb production using Chinese hamster ovary (CHO) cells. mAb reduction susceptibility has been reported to be cell line-dependent, but there are no efficient methods for screening reduction-unsusceptible cell lines. Here we present a novel screening method with Ambr15 for the susceptibility, which allows 48 different cell lines to be evaluated simultaneously.

9:00 am

Building a Robust Informatics and Automation Framework to Accelerate High-Throughput Workflows

Avinash Gill, PhD, Group Leader, BioMolecular Research, Genentech Inc.

High-throughput (HTP) workflows are critical elements of large-scale drug discovery campaigns, especially during screening and lead identification. By incorporating automation and informatics tools, HTP workflows can be built to effectively manage tasks, optimize resource usage, ingest large volumes of data, and improve productivity. By capturing and leveraging data from automated processes effectively, we aim to enhance decision-making to positively impact the discovery and development of therapeutics for patients.

9:30 am

Increasing Automated Expression and Purification Processes for High-Throughput Platforms

Felix Findeisen, PhD, Associate Director, Discovery Biotherapeutics, Bristol Myers Squibb

We have built automated custom expression and purification systems, allowing accelerated protein production of antibodies and target proteins at microgram-to-gram production scales. These semi-automated workflows allow flexible support of early drug discovery pipelines from earliest production to upscaling of lead panels, providing material for HTP characterization, in vitro and in vivo experiments. Production processes will be exemplified using examples of rapid and scalable support of example projects.

10:00 am Protein-in-Hand in 48 Hours: Multiplexing Protein Expression and Purification Screen on a Digital Microfluidic Device

Michael Chen, PhD, CEO & CoFounder, Nuclera

The eProtein Discovery™ System can screen multiple protein expression and purification profiles and deliver reliable proteins in-hand in less than 48 hours.  eProtein Discovery reduces the timelines and costs associated with protein production through 24 customizable expression conditions and subsequent identification of optimal conditions for scale-up. Integrating cell-free protein synthesis and digital microfluidics on smart cartridges, Nuclera’s eProtein Discovery enables rapid access to even challenging proteins at high quality.

Networking Coffee Break10:30 am

11:00 am

Accelerating Drug Discovery: High-Throughput Semi-Automated Expression Platform for Antibody Lead Generation

Goncalo Silva, PhD, Senior Scientist, Biopharm Discovery, GSK

We report the development of a semi-automated platform to express panels of antibodies in high-throughput at mid-scale for developability and functional assays whilst minimizing hands-on lab work. Our platform enables parallel production of 100 mg of material for 96 clones, keeping the discovery funnel wide for longer. We have created digital workflows for sample and data-tracking, enabling data reuse and driving refinement of AI/ML models.

11:30 am

Progressive Automation: Developing a High-Throughput Pipeline for the Expression, Purification, and High-Fidelity Affinity Analyses of CHO-Expressed Antibodies

Edwin A. Saada, PhD, Scientist, Infectious Diseases, Lawrence Livermore National Laboratories

Here, we present a multi-component experimental pipeline designed for efficiency and adaptability within the Generative Unconstrained Intelligent Drug Engineering (GUIDE) program. This semi-automated laboratory integrates processes from molecular cloning to CHO-derived antibody affinity and characterization assessments in high-throughput fashion, emphasizing scalability and speed. Through the generation of comprehensive experimental data, our approach empowers computational models for antibody engineering, marking a significant leap forward in the efficiency of high-throughput antibody development.


12:00 pm

FEATURED PRESENTATION: Generating and Measuring Protein-Antibody Interactions in Cell-Free Lysate Reaction Systems without the Need for Protein Purification

Matthew Coleman, PhD, Senior Scientist & Group Leader, Biosciences and Biotechnology Division, Lawrence Livermore National Laboratory

Computational design platforms can provide multitudes of candidate antibody designs in extremely short timescales, but these designs require extensive experimental validation for enabling accurate predictions, often taking weeks to months. Cell-free protein synthesis (CFPS) systems are versatile and facilitate turn-around in design, production, and characterization of antibodies. Here, we adapt several CFPS systems for producing computationally designed affinity reagents to showcase the amenability of this technology for rapidly producing and characterizing affinity reagents of interest without the need for purification. Importantly, this utilizes microfluidics for reaction encapsulation combined with fluorescent correlation spectroscopy for screening interaction kinetics in real time.

Close of Conference12:30 pm






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